Cancer miRNA Regulatory Network

This page contains all miRNA mediated regulation and functional enrichment for HSCC Head-Neck Chung cluster number 11. Information about head and neck cancer can be found on Wikipedia, and further information about the "HSCC Head-Neck Chung" dataset can be found in Chung et al., 2004.

Weeder-miRvestigator	PITA	TargetScan
zzz999	zzz999	zzz999

GO ID	GO Term	Annotated Genes in Cluster
GO:0000003	reproduction	475
GO:0000075	cell cycle checkpoint	130
GO:0000082	G1/S transition of mitotic cell cycle	118
GO:0000084	S phase of mitotic cell cycle	94
GO:0000216	M/G1 transition of mitotic cell cycle	61
GO:0000375	RNA splicing, via transesterification reactions	96
GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	93
GO:0000398	nuclear mRNA splicing, via spliceosome	93
GO:0000722	telomere maintenance via recombination	17
GO:0001701	in utero embryonic development	128
GO:0001775	cell activation	351
GO:0002376	immune system process	714
GO:0002684	positive regulation of immune system process	240
GO:0002694	regulation of leukocyte activation	127
GO:0003012	muscle system process	145
GO:0003013	circulatory system process	154
GO:0003015	heart process	66
GO:0003018	vascular process in circulatory system	63
GO:0005975	carbohydrate metabolic process	316
GO:0006066	alcohol metabolic process	283
GO:0006082	organic acid metabolic process	419
GO:0006091	generation of precursor metabolites and energy	247
GO:0006098	pentose-phosphate shunt	10
GO:0006119	oxidative phosphorylation	39
GO:0006120	mitochondrial electron transport, NADH to ubiquinone	25
GO:0006271	DNA strand elongation involved in DNA replication	22
GO:0006283	transcription-coupled nucleotide-excision repair	29
GO:0006312	mitotic recombination	25
GO:0006353	transcription termination, DNA-dependent	44
GO:0006354	transcription elongation, DNA-dependent	51
GO:0006366	transcription from RNA polymerase II promoter	542
GO:0006368	transcription elongation from RNA polymerase II promoter	41
GO:0006370	mRNA capping	21
GO:0006415	translational termination	54
GO:0006457	protein folding	113
GO:0006461	protein complex assembly	310
GO:0006464	protein modification process	1071
GO:0006468	protein phosphorylation	571
GO:0006508	proteolysis	430
GO:0006511	ubiquitin-dependent protein catabolic process	176
GO:0006520	cellular amino acid metabolic process	201
GO:0006521	regulation of cellular amino acid metabolic process	38
GO:0006605	protein targeting	164
GO:0006629	lipid metabolic process	488
GO:0006662	glycerol ether metabolic process	55
GO:0006694	steroid biosynthetic process	85
GO:0006702	androgen biosynthetic process	10
GO:0006720	isoprenoid metabolic process	37
GO:0006733	oxidoreduction coenzyme metabolic process	32
GO:0006739	NADP metabolic process	16
GO:0006740	NADPH regeneration	11
GO:0006778	porphyrin metabolic process	26
GO:0006793	phosphorus metabolic process	718
GO:0006796	phosphate metabolic process	718
GO:0006810	transport	1466
GO:0006873	cellular ion homeostasis	245
GO:0006886	intracellular protein transport	253
GO:0006915	apoptosis	691
GO:0006917	induction of apoptosis	224
GO:0006928	cellular component movement	372
GO:0006935	chemotaxis	295
GO:0006936	muscle contraction	136
GO:0006950	response to stress	1284
GO:0006952	defense response	454
GO:0006955	immune response	471
GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	45
GO:0007154	cell communication	886
GO:0007165	signal transduction	1766
GO:0007166	cell surface receptor linked signaling pathway	964
GO:0007167	enzyme linked receptor protein signaling pathway	427
GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	333
GO:0007220	Notch receptor processing	13
GO:0007264	small GTPase mediated signal transduction	288
GO:0007267	cell-cell signaling	486
GO:0007411	axon guidance	195
GO:0007584	response to nutrient	107
GO:0007586	digestion	60
GO:0007597	blood coagulation, intrinsic pathway	14
GO:0007610	behavior	197
GO:0008015	blood circulation	154
GO:0008104	protein localization	562
GO:0008152	metabolic process	3943
GO:0008202	steroid metabolic process	162
GO:0008203	cholesterol metabolic process	69
GO:0008283	cell proliferation	669
GO:0008284	positive regulation of cell proliferation	272
GO:0008286	insulin receptor signaling pathway	95
GO:0008610	lipid biosynthetic process	211
GO:0008645	hexose transport	62
GO:0009056	catabolic process	729
GO:0009057	macromolecule catabolic process	346
GO:0009060	aerobic respiration	27
GO:0009308	amine metabolic process	267
GO:0009408	response to heat	39
GO:0009452	RNA capping	21
GO:0009605	response to external stimulus	561
GO:0009607	response to biotic stimulus	249
GO:0009611	response to wounding	508
GO:0009615	response to virus	104
GO:0009628	response to abiotic stimulus	225
GO:0009636	response to toxin	49
GO:0009719	response to endogenous stimulus	369
GO:0009725	response to hormone stimulus	334
GO:0009891	positive regulation of biosynthetic process	430
GO:0009893	positive regulation of metabolic process	624
GO:0009894	regulation of catabolic process	165
GO:0009896	positive regulation of catabolic process	52
GO:0009952	anterior/posterior pattern formation	80
GO:0009987	cellular process	5404
GO:0009991	response to extracellular stimulus	167
GO:0010033	response to organic substance	660
GO:0010243	response to organic nitrogen	57
GO:0010466	negative regulation of peptidase activity	25
GO:0010498	proteasomal protein catabolic process	115
GO:0010604	positive regulation of macromolecule metabolic process	580
GO:0010817	regulation of hormone levels	176
GO:0010827	regulation of glucose transport	47
GO:0010833	telomere maintenance via telomere lengthening	25
GO:0012501	programmed cell death	696
GO:0012502	induction of programmed cell death	225
GO:0014075	response to amine stimulus	38
GO:0015031	protein transport	463
GO:0015749	monosaccharide transport	62
GO:0015758	glucose transport	62
GO:0015980	energy derivation by oxidation of organic compounds	179
GO:0016032	viral reproduction	249
GO:0016043	cellular component organization	1649
GO:0016053	organic acid biosynthetic process	121
GO:0016125	sterol metabolic process	72
GO:0016310	phosphorylation	640
GO:0016477	cell migration	303
GO:0019058	viral infectious cycle	122
GO:0019080	viral genome expression	85
GO:0019083	viral transcription	85
GO:0019362	pyridine nucleotide metabolic process	29
GO:0019538	protein metabolic process	1636
GO:0019725	cellular homeostasis	295
GO:0019752	carboxylic acid metabolic process	408
GO:0019941	modification-dependent protein catabolic process	181
GO:0022403	cell cycle phase	372
GO:0022415	viral reproductive process	133
GO:0022607	cellular component assembly	577
GO:0022616	DNA strand elongation	23
GO:0022900	electron transport chain	82
GO:0022904	respiratory electron transport chain	66
GO:0030163	protein catabolic process	226
GO:0030500	regulation of bone mineralization	25
GO:0031018	endocrine pancreas development	62
GO:0031099	regeneration	63
GO:0031100	organ regeneration	28
GO:0031145	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	60
GO:0031325	positive regulation of cellular metabolic process	591
GO:0031328	positive regulation of cellular biosynthetic process	422
GO:0031570	DNA integrity checkpoint	80
GO:0031667	response to nutrient levels	152
GO:0031960	response to corticosteroid stimulus	67
GO:0032201	telomere maintenance via semi-conservative replication	19
GO:0032268	regulation of cellular protein metabolic process	493
GO:0032502	developmental process	1725
GO:0032570	response to progesterone stimulus	18
GO:0032787	monocarboxylic acid metabolic process	194
GO:0032870	cellular response to hormone stimulus	176
GO:0032879	regulation of localization	473
GO:0033013	tetrapyrrole metabolic process	26
GO:0033036	macromolecule localization	671
GO:0033238	regulation of cellular amine metabolic process	43
GO:0033273	response to vitamin	68
GO:0033554	cellular response to stress	484
GO:0034370	triglyceride-rich lipoprotein particle remodeling	9
GO:0034372	very-low-density lipoprotein particle remodeling	9
GO:0034613	cellular protein localization	306
GO:0034621	cellular macromolecular complex subunit organization	295
GO:0034622	cellular macromolecular complex assembly	218
GO:0035150	regulation of tube size	56
GO:0035270	endocrine system development	97
GO:0040011	locomotion	526
GO:0042060	wound healing	326
GO:0042110	T cell activation	142
GO:0042127	regulation of cell proliferation	482
GO:0042221	response to chemical stimulus	1193
GO:0042330	taxis	295
GO:0042440	pigment metabolic process	39
GO:0042445	hormone metabolic process	99
GO:0042493	response to drug	174
GO:0042592	homeostatic process	482
GO:0042773	ATP synthesis coupled electron transport	35
GO:0042775	mitochondrial ATP synthesis coupled electron transport	35
GO:0042981	regulation of apoptosis	563
GO:0043065	positive regulation of apoptosis	298
GO:0043067	regulation of programmed cell death	567
GO:0043068	positive regulation of programmed cell death	301
GO:0043085	positive regulation of catalytic activity	360
GO:0043086	negative regulation of catalytic activity	186
GO:0043161	proteasomal ubiquitin-dependent protein catabolic process	112
GO:0043170	macromolecule metabolic process	2940
GO:0043266	regulation of potassium ion transport	11
GO:0043412	macromolecule modification	1092
GO:0043434	response to peptide hormone stimulus	203
GO:0043632	modification-dependent macromolecule catabolic process	181
GO:0043691	reverse cholesterol transport	13
GO:0043933	macromolecular complex subunit organization	480
GO:0044057	regulation of system process	189
GO:0044237	cellular metabolic process	3554
GO:0044238	primary metabolic process	3600
GO:0044246	regulation of multicellular organismal metabolic process	14
GO:0044248	cellular catabolic process	589
GO:0044255	cellular lipid metabolic process	322
GO:0044257	cellular protein catabolic process	191
GO:0044260	cellular macromolecule metabolic process	2676
GO:0044265	cellular macromolecule catabolic process	276
GO:0044267	cellular protein metabolic process	1414
GO:0044419	interspecies interaction between organisms	215
GO:0045184	establishment of protein localization	475
GO:0045321	leukocyte activation	223
GO:0045333	cellular respiration	91
GO:0046394	carboxylic acid biosynthetic process	121
GO:0046627	negative regulation of insulin receptor signaling pathway	14
GO:0046649	lymphocyte activation	191
GO:0046782	regulation of viral transcription	37
GO:0046907	intracellular transport	414
GO:0048011	nerve growth factor receptor signaling pathway	141
GO:0048518	positive regulation of biological process	1355
GO:0048519	negative regulation of biological process	1177
GO:0048522	positive regulation of cellular process	1223
GO:0048523	negative regulation of cellular process	1075
GO:0048545	response to steroid hormone stimulus	144
GO:0048731	system development	1367
GO:0048856	anatomical structure development	1490
GO:0048870	cell motility	316
GO:0048878	chemical homeostasis	329
GO:0050434	positive regulation of viral transcription	32
GO:0050778	positive regulation of immune response	159
GO:0050789	regulation of biological process	3382
GO:0050790	regulation of catalytic activity	542
GO:0050792	regulation of viral reproduction	44
GO:0050794	regulation of cellular process	3202
GO:0050801	ion homeostasis	264
GO:0050865	regulation of cell activation	134
GO:0050878	regulation of body fluid levels	314
GO:0050880	regulation of blood vessel size	56
GO:0050892	intestinal absorption	15
GO:0050896	response to stimulus	2863
GO:0050900	leukocyte migration	107
GO:0051049	regulation of transport	343
GO:0051050	positive regulation of transport	171
GO:0051179	localization	1740
GO:0051186	cofactor metabolic process	124
GO:0051187	cofactor catabolic process	23
GO:0051234	establishment of localization	1485
GO:0051239	regulation of multicellular organismal process	626
GO:0051241	negative regulation of multicellular organismal process	135
GO:0051246	regulation of protein metabolic process	539
GO:0051259	protein oligomerization	117
GO:0051270	regulation of cellular component movement	151
GO:0051320	S phase	98
GO:0051325	interphase	206
GO:0051329	interphase of mitotic cell cycle	201
GO:0051340	regulation of ligase activity	68
GO:0051351	positive regulation of ligase activity	57
GO:0051352	negative regulation of ligase activity	50
GO:0051384	response to glucocorticoid stimulus	65
GO:0051385	response to mineralocorticoid stimulus	16
GO:0051412	response to corticosterone stimulus	13
GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	47
GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	50
GO:0051438	regulation of ubiquitin-protein ligase activity	66
GO:0051439	regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	55
GO:0051443	positive regulation of ubiquitin-protein ligase activity	55
GO:0051444	negative regulation of ubiquitin-protein ligase activity	50
GO:0051603	proteolysis involved in cellular protein catabolic process	190
GO:0051605	protein maturation by peptide bond cleavage	37
GO:0051641	cellular localization	730
GO:0051649	establishment of localization in cell	666
GO:0051674	localization of cell	316
GO:0051704	multi-organism process	454
GO:0051716	cellular response to stimulus	2109
GO:0051789	response to protein stimulus	75
GO:0051817	modification of morphology or physiology of other organism involved in symbiotic interaction	20
GO:0051917	regulation of fibrinolysis	11
GO:0051969	regulation of transmission of nerve impulse	86
GO:0055080	cation homeostasis	189
GO:0055114	oxidation-reduction process	473
GO:0060047	heart contraction	66
GO:0060334	regulation of interferon-gamma-mediated signaling pathway	14
GO:0065003	macromolecular complex assembly	396
GO:0065007	biological regulation	3626
GO:0065008	regulation of biological quality	1159
GO:0065009	regulation of molecular function	644
GO:0070167	regulation of biomineral tissue development	27
GO:0070271	protein complex biogenesis	311

miRNA	Method	GO ID	GO Term	Overlap	GO Annotated Genes	Cluster Size	miRNA Targets Genes	P-Value

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